C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family F (with FYVE domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436066 PLEKHF1-001 ENSG00000166289 9606 + 19:29665056-29675457 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436066
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436066 3.244±0.00 8.516±0.00 1.395±1.30 6.310±5.42 1.760±1.44 2.778±2.04 3.430±0.00 5.328±0.00 2.715±2.06 20.526±11.65 15.260±9.99 9.685±2.92 4.576±3.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TZ CIL_0008TZ_0001 VISTA 19:29588658-30189738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005764 IDA lysosome
GO:0005765 IC lysosomal membrane
GO:0005768 IDA endosome
GO:0006915 IEA apoptotic process
GO:0007032 IMP endosome organization
GO:0010008 IC endosome membrane
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0010508 IDA positive regulation of autophagy
GO:0016050 IMP vesicle organization
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0046872 IEA metal ion binding
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0072659 IMP protein localization to plasma membrane
GO:2001244 IEA positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098513 Plekhf1-201 protein_coding Mus_musculus 0 830

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