C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family F (with FYVE domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592810 PLEKHF1-002 ENSG00000166289 9606 + 19:29665459-29674843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungOvaryENST00000592810
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Ovary
ENST00000592810 1.966±0.00 3.194±0.00 1.586±0.00 2.599±0.00 1.710±1.29 1.043±0.00 2.301±0.00 3.639±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TZ CIL_0008TZ_0001 VISTA 19:29588658-30189738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005764 IDA lysosome
GO:0005765 IC lysosomal membrane
GO:0005768 IDA endosome
GO:0006915 IEA apoptotic process
GO:0007032 IMP endosome organization
GO:0010008 IC endosome membrane
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0010508 IDA positive regulation of autophagy
GO:0016050 IMP vesicle organization
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0046872 IEA metal ion binding
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0072659 IMP protein localization to plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098513 Plekhf1-201 protein_coding Mus_musculus 0 830

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