C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in liver cancer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098826 Dlc1-001 ENSMUSG00000031523 10090 - 8:36567751-36733054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMuscleOvaryENSMUST00000098826
Transcript ID Adrenal Brain Colon Liver Muscle Ovary
ENSMUST00000098826 2.711±0.13 1.016±0.00 0.996±0.11 1.502±0.68 0.394±0.00 1.700±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VG CIL_0003VG_0002 CGP 8:36457548-36953143
CIL_000274 CIL_000274_0002 CGP 8:36567751-36995531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0003007 IMP heart morphogenesis
GO:0005096 IEA GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0007165 IEA signal transduction
GO:0008285 ISS negative regulation of cell proliferation
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane
GO:0021575 IMP hindbrain morphogenesis
GO:0030036 IMP actin cytoskeleton organization
GO:0030054 IEA cell junction
GO:0030900 IMP forebrain development
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048041 IMP focal adhesion assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276297 DLC1-001 protein_coding Homo_sapiens 0 3568
ENST00000358919 DLC1-002 protein_coding Homo_sapiens 0 3568
ENST00000498524 ANKRD28-006 retained_intron Homo_sapiens 0.00008 55
ENST00000510250 DLC1-017 retained_intron Homo_sapiens 0 1940
ENST00000510318 DLC1-006 processed_transcript Homo_sapiens 0 1646
ENST00000512044 DLC1-005 protein_coding Homo_sapiens 0 3716
ENST00000513347 ATP5G1-002 retained_intron Homo_sapiens 0.0001 53
ENST00000513883 DLC1-007 processed_transcript Homo_sapiens 0 348
ENST00000520226 DLC1-008 protein_coding Homo_sapiens 0 3570

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