C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline synthetase co-transcribed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098851 Prosc-202 ENSMUSG00000031485 10090 + 8:27042555-27050240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLungTestisENSMUST00000098851
Transcript ID Adrenal Brain Colon Lung Testis
ENSMUST00000098851 5.612±1.57 2.614±0.00 2.535±0.00 1.922±0.14 0.799±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0002 VISTA 8:26613996-27214881
CIL_0009C5 CIL_0009C5_0002 VISTA 8:26806327-27408431
CIL_0007QT CIL_0007QT_0002 VISTA 8:26806345-27408424
CIL_0002IV CIL_0002IV_0002 CGP 8:27023799-27056131
CIL_0002IW CIL_0002IW_0002 CGP 8:27042555-27123436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0030170 IBA pyridoxal phosphate binding
GO:1901605 IBA alpha-amino acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328195 PROSC-001 protein_coding Homo_sapiens 0 267
ENST00000518036 PROSC-006 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000520073 PROSC-004 retained_intron Homo_sapiens 0 267
ENST00000523187 PROSC-003 protein_coding Homo_sapiens 1e-35 154
ENST00000523358 PROSC-008 protein_coding Homo_sapiens 0 267
ENST00000523994 PROSC-005 retained_intron Homo_sapiens 0 267

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