C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002IW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147471-ENSG00000020181 CGP 9606 8:37762593-37844896
GeneTranscriptPositionBiotype
ENSG00000104221 (BRF2)
BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
ENST00000220659 (BRF2-001) 37843268-37849904 protein_coding
ENST00000520601 (BRF2-005) 37844702-37849838 protein_coding
ENST00000521170 (BRF2-003) 37846957-37849861 protein_coding
ENST00000522539 (BRF2-004) 37847056-37849854 nonsense_mediated_decay
ENSG00000147471 (PROSC)
proline synthetase co-transcribed homolog (bacterial)
ENST00000328195 (PROSC-001) 37762593-37779767 protein_coding
ENST00000518036 (PROSC-006) 37762610-37772866 nonsense_mediated_decay
ENST00000520073 (PROSC-004) 37762595-37766741 retained_intron
ENST00000521631 (PROSC-009) 37772753-37775473 retained_intron
ENST00000522808 (PROSC-010) 37774936-37778080 retained_intron
ENST00000523187 (PROSC-003) 37762600-37775451 protein_coding
ENST00000523358 (PROSC-008) 37762600-37772891 protein_coding
ENST00000523521 (PROSC-012) 37766280-37775481 protein_coding
ENST00000523994 (PROSC-005) 37762655-37766716 retained_intron
CIL_0002IW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031485-ENSMUSG00000031486 CGP 10090 8:27042555-27123436
GeneTranscriptPositionBiotype
ENSMUSG00000031485 (Prosc)
proline synthetase co-transcribed
ENSMUST00000033875 (Prosc-201) 27042555-27056131 protein_coding
ENSMUST00000098851 (Prosc-202) 27042555-27050240 protein_coding
ENSMUSG00000031486 (Gpr124)
G protein-coupled receptor 124
ENSMUST00000033876 (Gpr124-001) 27085598-27123436 protein_coding
ENSMUST00000178514 (Gpr124-002) 27085583-27123435 protein_coding
ENSMUST00000179207 (Gpr124-003) 27114133-27118834 nonsense_mediated_decay
ENSMUST00000179351 (Gpr124-005) 27117369-27121623 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IW_0001ENSG00000104221ENST00000220659ENST00000520601ENST00000521170ENST00000522539ENSG00000147471ENST00000328195ENST00000518036ENST00000520073ENST00000521631ENST00000522808ENST00000523187ENST00000523358ENST00000523521ENST00000523994CIL_0002IW_0002ENSMUSG00000031485ENSMUST00000033875ENSMUST00000098851ENSMUSG00000031486ENSMUST00000033876ENSMUST00000178514ENSMUST00000179207ENSMUST00000179351
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IW_0001ENSG00000104221ENST00000220659ENSG00000147471ENST00000328195ENST00000521631ENST00000523358ENST00000523521CIL_0002IW_0002ENSMUSG00000031485ENSMUST00000033875ENSMUST00000098851ENSMUSG00000031486ENSMUST00000033876ENSMUST00000178514ENSMUST00000179207ENSMUST00000179351
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104221 ENST00000220659 10.896±0.00 14.305±0.00 0.821±0.00 3.322±1.59 5.529±3.36 4.841±3.16 2.845±2.02 3.438±2.44 3.584±0.62 4.866±3.27 5.036±1.85 10.628±8.74 24.246±9.83 8.037±3.20
ENST00000520601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147471 ENST00000328195 14.895±0.00 11.820±0.00 3.318±0.00 8.651±1.89 12.034±6.31 14.880±7.48 8.550±6.16 17.933±5.29 11.366±7.12 10.876±2.69 10.580±7.08 14.231±6.39 9.275±2.47 6.015±4.21
ENST00000518036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.982±0.00 18.015±0.00 5.262±0.00
ENST00000522808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523358 N/A N/A 3.053±0.00 10.856±0.00 N/A N/A 4.432±0.00 N/A 9.083±0.00 N/A 6.798±0.00 10.126±0.00 N/A N/A
ENST00000523521 N/A N/A 7.682±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031485 ENSMUST00000033875 8.913±0.46 11.604±3.05 9.062±1.87 5.730±0.48 7.452±0.90 6.625±0.47 8.285±3.25 25.892±0.38 6.953±4.17 5.618±0.20 5.652±2.82 6.507±1.43 9.072±3.67 2.869±1.35
ENSMUST00000098851 N/A 5.612±1.57 N/A 2.614±0.00 N/A 2.535±0.00 N/A N/A N/A 1.922±0.14 N/A N/A N/A 0.799±0.00
ENSMUSG00000031486 ENSMUST00000033876 19.150±13.78 4.852±1.75 16.743±3.68 3.675±1.32 5.018±2.00 6.497±2.20 2.632±0.53 6.693±0.97 1.303±0.57 8.675±3.64 0.466±0.09 12.164±6.90 5.965±3.30 0.353±0.03
ENSMUST00000178514 N/A 4.106±2.52 2.264±0.00 0.800±0.07 3.613±1.46 4.806±2.10 0.627±0.01 2.234±0.38 0.313±0.04 5.953±3.16 0.283±0.00 12.366±7.71 3.010±0.00 0.118±0.11
ENSMUST00000179207 N/A N/A N/A 3.049±0.00 N/A N/A N/A N/A N/A N/A N/A 6.155±0.00 3.529±1.81 N/A
ENSMUST00000179351 N/A 6.479±0.55 N/A N/A 9.304±2.79 7.657±0.99 N/A N/A N/A 12.534±1.20 N/A 21.816±2.49 N/A N/A

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