C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline synthetase co-transcribed homolog (bacterial)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328195 PROSC-001 ENSG00000147471 9606 + 8:37762593-37779767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328195 14.895±0.00 11.820±0.00 3.318±0.00 8.651±1.89 12.034±6.31 14.880±7.48 8.550±6.16 17.933±5.29 11.366±7.12 10.876±2.69 10.580±7.08 14.231±6.39 9.275±2.47 6.015±4.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000802 CIL_000802_0001 VISTA 8:37337791-37938686
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829
CIL_0002IV CIL_0002IV_0001 CGP 8:37736599-37779767
CIL_0002IW CIL_0002IW_0001 CGP 8:37762593-37844896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IDA intracellular
GO:0005737 NAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0030170 IBA pyridoxal phosphate binding
GO:0070062 IDA extracellular vesicular exosome
GO:1901605 IBA alpha-amino acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033875 Prosc-201 protein_coding Mus_musculus 0 830
ENSMUST00000098851 Prosc-202 protein_coding Mus_musculus 0 267

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