C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanoma cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098852 Mcam-002 ENSMUSG00000032135 10090 + 9:44134658-44142724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098852 48.079±17.52 9.625±3.75 45.751±6.48 1.558±0.60 24.191±2.29 15.432±1.58 5.491±1.13 2.754±0.34 0.984±0.32 38.422±6.95 3.068±0.62 31.005±4.76 4.700±3.02 1.693±0.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 ISO plasma membrane
GO:0007155 ISO cell adhesion
GO:0007157 ISO heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264036 MCAM-001 protein_coding Homo_sapiens 0 1328
ENST00000524940 MCAM-005 processed_transcript Homo_sapiens 0 226
ENST00000525586 MCAM-002 retained_intron Homo_sapiens 0 833
ENST00000528533 MCAM-003 retained_intron Homo_sapiens 0 1114
ENST00000528976 MCAM-016 processed_transcript Homo_sapiens 0 302

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