C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TSC22 domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099090 Tsc22d2-201 ENSMUSG00000027806 10090 + 3:58415689-58466787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099090 3.330±1.80 10.583±5.71 1.583±0.80 0.854±0.23 6.171±5.65 6.242±0.42 1.333±0.87 2.317±1.81 1.413±0.76 1.920±0.36 1.220±0.22 9.290±5.39 1.236±0.38 2.372±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QZ CIL_0002QZ_0002 CGP 3:57841895-58466787
CIL_0002QY CIL_0002QY_0002 CGP 3:58415689-58525873

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006970 IDA response to osmotic stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361875 TSC22D2-001 protein_coding Homo_sapiens 0 3749
ENST00000460316 TSC22D2-008 retained_intron Homo_sapiens 0 1149
ENST00000466814 TSC22D2-003 protein_coding Homo_sapiens 0 1764
ENST00000480589 TSC22D2-005 protein_coding Homo_sapiens 0 691
ENST00000485421 TSC22D2-004 nonsense_mediated_decay Homo_sapiens 0 579
ENST00000492828 TSC22D2-007 processed_transcript Homo_sapiens 4e-27 124

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