C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002QY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196428-ENSG00000120742 CGP 9606 3:150408335-150603228
GeneTranscriptPositionBiotype
ENSG00000120742 (SERP1)
stress-associated endoplasmic reticulum protein 1
ENST00000239944 (SERP1-201) 150541994-150546641 protein_coding
ENST00000463647 (SERP1-007) 150566385-150583155 processed_transcript
ENST00000479209 (SERP1-001) 150541998-150603174 protein_coding
ENST00000484608 (SERP1-006) 150566799-150603168 processed_transcript
ENST00000487153 (SERP1-009) 150544292-150546501 protein_coding
ENST00000490945 (SERP1-005) 150565796-150603228 processed_transcript
ENST00000491195 (SERP1-008) 150546790-150603170 processed_transcript
ENST00000491660 (SERP1-011) 150545397-150546499 protein_coding
ENSG00000144895 (EIF2A)
eukaryotic translation initiation factor 2A, 65kDa
ENST00000273435 (EIF2A-004) 150546794-150584242 protein_coding
ENST00000406576 (EIF2A-003) 150546787-150584115 protein_coding
ENST00000460851 (EIF2A-001) 150546694-150584242 protein_coding
ENST00000462221 (EIF2A-013) 150546814-150572061 nonsense_mediated_decay
ENST00000463863 (EIF2A-006) 150546678-150558729 retained_intron
ENST00000465535 (EIF2A-015) 150568032-150584234 protein_coding
ENST00000469331 (EIF2A-011) 150546790-150562908 retained_intron
ENST00000472926 (EIF2A-014) 150567399-150568219 retained_intron
ENST00000473499 (EIF2A-007) 150546725-150552883 retained_intron
ENST00000474505 (EIF2A-009) 150546786-150564899 retained_intron
ENST00000477551 (EIF2A-005) 150552354-150584242 nonsense_mediated_decay
ENST00000482093 (EIF2A-010) 150546788-150568026 protein_coding
ENST00000482471 (EIF2A-016) 150572496-150583903 processed_transcript
ENST00000487799 (EIF2A-002) 150546685-150584023 protein_coding
ENST00000490505 (EIF2A-012) 150546800-150564377 nonsense_mediated_decay
ENST00000494558 (EIF2A-008) 150546767-150568274 nonsense_mediated_decay
ENSG00000196428 (TSC22D2)
TSC22 domain family, member 2
ENST00000361875 (TSC22D2-001) 150408335-150466431 protein_coding
ENST00000460316 (TSC22D2-008) 150456951-150459128 retained_intron
ENST00000466814 (TSC22D2-003) 150411009-150460116 protein_coding
ENST00000480589 (TSC22D2-005) 150410969-150458861 protein_coding
ENST00000485421 (TSC22D2-004) 150411179-150458679 nonsense_mediated_decay
ENST00000492828 (TSC22D2-007) 150423039-150423451 processed_transcript
CIL_0002QY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027806-ENSMUSG00000027808 CGP 10090 3:58415689-58525873
GeneTranscriptPositionBiotype
ENSMUSG00000027806 (Tsc22d2)
TSC22 domain family, member 2
ENSMUST00000099090 (Tsc22d2-201) 58415689-58466787 protein_coding
ENSMUSG00000027808 (Serp1)
stress-associated endoplasmic reticulum protein 1
ENSMUST00000029385 (Serp1-001) 58521969-58525873 protein_coding
ENSMUSG00000027810 (Eif2a)
eukaryotic translation initiation factor 2A
ENSMUST00000029387 (Eif2a-001) 58525821-58557501 protein_coding
ENSMUST00000135876 (Eif2a-002) 58526043-58555644 nonsense_mediated_decay
ENSMUST00000137469 (Eif2a-004) 58526042-58545823 retained_intron
ENSMUST00000138827 (Eif2a-005) 58543280-58545823 retained_intron
ENSMUST00000138848 (Eif2a-007) 58526303-58545611 protein_coding
ENSMUST00000148251 (Eif2a-006) 58544233-58550726 retained_intron
ENSMUST00000154219 (Eif2a-003) 58526056-58557501 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QY_0001ENSG00000120742ENST00000239944ENST00000479209ENST00000487153ENSG00000144895ENST00000273435ENST00000406576ENST00000460851ENST00000465535ENST00000477551ENST00000482471ENST00000487799ENSG00000196428ENST00000361875ENST00000460316ENST00000466814ENST00000480589ENST00000485421CIL_0002QY_0002ENSMUSG00000027806ENSMUST00000099090ENSMUSG00000027808ENSMUST00000029385ENSMUSG00000027810ENSMUST00000029387ENSMUST00000135876ENSMUST00000154219
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120742 ENST00000239944 32.148±0.00 26.851±0.00 3.703±0.00 21.452±7.59 23.277±8.82 25.545±14.26 4.971±2.96 34.245±15.29 21.965±13.54 31.458±15.95 N/A 24.770±10.29 35.896±6.87 29.607±12.75
ENST00000463647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479209 N/A N/A 1.974±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487153 N/A N/A N/A N/A N/A N/A N/A N/A 147.646±0.00 N/A N/A N/A N/A N/A
ENST00000490945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144895 ENST00000273435 N/A N/A N/A 7.919±0.00 N/A N/A N/A 6.083±0.00 N/A N/A N/A N/A N/A N/A
ENST00000406576 N/A N/A N/A N/A N/A N/A 13.074±0.00 N/A N/A N/A 26.910±0.00 11.337±0.00 N/A N/A
ENST00000460851 N/A N/A N/A N/A 7.331±0.00 N/A 4.168±0.00 N/A 8.722±0.00 8.156±0.00 16.583±0.00 17.346±6.31 16.847±0.00 N/A
ENST00000462221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465535 N/A 33.440±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.687±0.00 N/A N/A N/A
ENST00000482093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 74.143±0.00 88.570±0.00 N/A
ENST00000487799 N/A N/A 2.543±0.00 N/A N/A N/A 12.366±0.00 N/A N/A N/A 3.354±0.00 N/A N/A N/A
ENST00000490505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196428 ENST00000361875 N/A 0.774±0.00 1.293±0.00 2.097±0.46 1.114±0.00 0.934±0.00 0.747±0.38 1.297±0.00 0.678±0.27 1.626±0.00 0.555±0.40 0.839±0.06 0.712±0.39 1.649±0.15
ENST00000460316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.669±0.00 N/A N/A N/A
ENST00000466814 5.395±0.00 5.147±0.00 3.027±0.00 2.334±1.10 5.505±0.79 3.628±0.26 2.827±1.99 4.064±1.99 3.118±0.84 4.140±1.28 1.533±0.85 5.962±0.59 3.941±1.74 10.790±2.02
ENST00000480589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.917±0.00 N/A N/A N/A
ENST00000485421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.070±0.00
ENST00000492828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027806 ENSMUST00000099090 3.330±1.80 10.583±5.71 1.583±0.80 0.854±0.23 6.171±5.65 6.242±0.42 1.333±0.87 2.317±1.81 1.413±0.76 1.920±0.36 1.220±0.22 9.290±5.39 1.236±0.38 2.372±1.73
ENSMUSG00000027808 ENSMUST00000029385 31.555±8.79 245.846±33.67 51.282±5.08 20.649±11.33 38.140±7.80 76.368±51.61 8.906±1.34 58.775±19.43 74.556±18.59 52.217±25.68 5.719±1.20 142.962±74.38 55.038±28.98 35.067±18.66
ENSMUSG00000027810 ENSMUST00000029387 5.083±0.15 N/A 18.698±0.18 12.724±0.57 8.745±0.00 N/A 5.005±1.30 N/A 22.498±5.00 N/A 12.767±1.10 N/A 18.759±6.41 N/A
ENSMUST00000135876 N/A N/A N/A N/A N/A N/A 3.436±0.16 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154219 N/A N/A N/A 4.612±0.00 N/A N/A N/A N/A N/A N/A 3.281±0.59 N/A 9.671±1.24 N/A

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