C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudix (nucleoside diphosphate linked moiety X)-type motif 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099130 Nudt6-201 ENSMUSG00000050174 10090 - 3:37404984-37419590 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000099130
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000099130 6.986±1.70 13.056±3.89 10.901±1.43 4.876±1.61 7.413±1.00 8.543±2.50 6.258±2.35 4.610±1.42 5.635±0.98 7.099±1.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_0006YK CIL_0006YK_0003 CGP 3:37404910-37579096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304430 NUDT6-001 protein_coding Homo_sapiens 0 647
ENST00000339154 NUDT6-002 protein_coding Homo_sapiens 0 568
ENST00000502270 NUDT6-007 protein_coding Homo_sapiens 0 385
ENST00000512116 NUDT6-006 nonsense_mediated_decay Homo_sapiens 0 568
ENST00000513517 NUDT6-003 retained_intron Homo_sapiens 0 329

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