C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007V2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1582 VISTA 9606 4:123162273-123765299
GeneTranscriptPositionBiotype
ENSG00000145375 (SPATA5)
spermatogenesis associated 5 		ENST00000274008 (SPATA5-001) 122923074-123319450 protein_coding
ENST00000422835 (SPATA5-002) 122923101-123102293 processed_transcript
ENSG00000164056 (SPRY1)
sprouty homolog 1, antagonist of FGF signaling (Drosophila) 		ENST00000339241 (SPRY1-002) 123396801-123403752 protein_coding
ENST00000394339 (SPRY1-001) 123399510-123403755 protein_coding
ENST00000505319 (SPRY1-004) 123396795-123401793 protein_coding
ENST00000507703 (SPRY1-003) 123398185-123402219 protein_coding
ENST00000508849 (SPRY1-006) 123399968-123401696 protein_coding
ENST00000515726 (SPRY1-005) 123396811-123398337 processed_transcript
ENST00000610581 (SPRY1-201) 123396795-123403760 protein_coding
ENST00000622283 (SPRY1-202) 123398386-123403760 protein_coding
ENSG00000226655 (AC096732.2)
 ENST00000439565 (AC096732.2-001) 123744923-123745673 lincRNA
ENSG00000228489 (RPL21P50)
ribosomal protein L21 pseudogene 50 		ENST00000417698 (RPL21P50-001) 123745750-123746226 processed_pseudogene
ENSG00000249125 (RP11-381N20.2)
 ENST00000503950 (RP11-381N20.2-001) 123490268-123522106 lincRNA
ENSG00000249464 (LINC01091)
long intergenic non-protein coding RNA 1091 		ENST00000508111 (LINC01091-002) 123650291-123930406 lincRNA
ENST00000511919 (LINC01091-003) 123650291-123930354 lincRNA
ENST00000514823 (LINC01091-001) 123650267-123666832 lincRNA
ENST00000515769 (LINC01091-004) 123774264-123865573 lincRNA
ENSG00000251526 (RP11-381N20.1)
 ENST00000508291 (RP11-381N20.1-001) 123505279-123527525 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007V2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1582 VISTA 10090 3:37371698-37974083
GeneTranscriptPositionBiotype
ENSMUSG00000027722 (Spata5)
spermatogenesis associated 5 		ENSMUST00000029277 (Spata5-002) 37420298-37579096 protein_coding
ENSMUST00000108112 (Spata5-001) 37419896-37579096 protein_coding
ENSMUST00000124347 (Spata5-005) 37432058-37439152 processed_transcript
ENSMUST00000130674 (Spata5-007) 37451721-37528356 processed_transcript
ENSMUST00000132958 (Spata5-008) 37528242-37579096 processed_transcript
ENSMUST00000138225 (Spata5-004) 37420864-37426153 processed_transcript
ENSMUST00000142199 (Spata5-006) 37436567-37439272 retained_intron
ENSMUST00000147687 (Spata5-003) 37420373-37425390 processed_transcript
ENSMUSG00000037211 (Spry1)
sprouty homolog 1 (Drosophila) 		ENSMUST00000038569 (Spry1-001) 37639958-37644598 protein_coding
ENSMUST00000108107 (Spry1-003) 37640080-37644598 protein_coding
ENSMUST00000108109 (Spry1-002) 37639947-37644598 protein_coding
ENSMUSG00000037225 (Fgf2)
fibroblast growth factor 2 		ENSMUST00000038885 (Fgf2-007) 37348653-37404889 protein_coding
ENSMUST00000091203 (Fgf2-005) 37380755-37404797 protein_coding
ENSMUST00000108120 (Fgf2-004) 37380755-37404797 protein_coding
ENSMUST00000138563 (Fgf2-001) 37348346-37405377 protein_coding
ENSMUST00000138710 (Fgf2-006) 37312519-37404866 processed_transcript
ENSMUST00000145228 (Fgf2-003) 37380659-37404797 processed_transcript
ENSMUST00000150021 (Fgf2-002) 37366990-37404797 processed_transcript
ENSMUSG00000050174 (Nudt6)
nudix (nucleoside diphosphate linked moiety X)-type motif 6 		ENSMUST00000052645 (Nudt6-001) 37404910-37419596 protein_coding
ENSMUST00000099130 (Nudt6-201) 37404984-37419590 protein_coding
ENSMUST00000108117 (Nudt6-004) 37404910-37419580 protein_coding
ENSMUST00000108118 (Nudt6-002) 37404910-37419580 protein_coding
ENSMUST00000133894 (Nudt6-008) 37405079-37410675 processed_transcript
ENSMUST00000138949 (Nudt6-005) 37412371-37419566 protein_coding
ENSMUST00000141438 (Nudt6-007) 37404982-37420211 processed_transcript
ENSMUST00000146324 (Nudt6-006) 37404910-37420186 processed_transcript
ENSMUST00000149449 (Nudt6-003) 37405356-37419573 protein_coding
ENSMUSG00000058174 (Gm5148)
predicted gene 5148 		ENSMUST00000079755 (Gm5148-001) 37714190-37724410 protein_coding
ENSMUST00000099128 (Gm5148-003) 37714326-37724490 protein_coding
ENSMUST00000108105 (Gm5148-002) 37714198-37724329 protein_coding
ENSMUST00000134904 (Gm5148-004) 37718025-37724331 processed_transcript
ENSMUSG00000063001 (Rps23-ps1)
ribosomal protein S23, pseudogene 1 		ENSMUST00000077976 (Rps23-ps1-201) 37714717-37715212 pseudogene
ENSMUSG00000080723 (Gm12564)
predicted gene 12564 		ENSMUST00000119860 (Gm12564-001) 37556183-37556503 processed_pseudogene
ENSMUSG00000081093 (Gm12565)
predicted gene 12565 		ENSMUST00000119004 (Gm12565-001) 37599424-37600072 processed_pseudogene
ENSMUSG00000085677 (4930594O21Rik)
RIKEN cDNA 4930594O21 gene 		ENSMUST00000129750 (4930594O21Rik-001) 37613923-37614826 lincRNA
ENSMUST00000144981 (4930594O21Rik-002) 37613913-37615276 lincRNA
ENSMUSG00000087457 (Gm7799)
predicted gene 7799 		ENSMUST00000133080 (Gm7799-001) 37959612-37960087 processed_pseudogene
ENSMUSG00000097304 (Rpl31-ps15)
ribosomal protein L31, pseudogene 15 		ENSMUST00000181857 (Rpl31-ps15-001) 37734730-37735104 processed_pseudogene
ENSMUSG00000100755 (Rps23-ps)
 ENSMUST00000116115 (Rps23-ps-001) 37714740-37715164 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007V2_0001ENSG00000145375ENST00000274008ENST00000422835ENSG00000164056ENST00000339241ENST00000394339ENST00000505319ENST00000507703ENST00000508849ENST00000515726ENST00000610581ENST00000622283ENSG00000226655ENST00000439565ENSG00000228489ENST00000417698ENSG00000249125ENST00000503950ENSG00000249464ENST00000508111ENST00000511919ENST00000514823ENST00000515769ENSG00000251526ENST00000508291CIL_0007V2_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007V2_0001ENSG00000145375ENST00000274008ENST00000422835ENSG00000164056ENST00000339241ENST00000394339ENST00000505319ENST00000507703ENST00000515726ENST00000622283ENSG00000226655ENST00000439565ENSG00000228489ENST00000417698ENSG00000249125ENST00000503950ENSG00000249464ENST00000508111ENST00000511919ENST00000514823ENST00000515769ENSG00000251526ENST00000508291CIL_0007V2_0002ENSMUSG00000027722ENSMUST00000029277ENSMUST00000108112ENSMUST00000130674ENSMUSG00000037211ENSMUST00000038569ENSMUST00000108107ENSMUST00000108109ENSMUSG00000037225ENSMUST00000038885ENSMUSG00000050174ENSMUST00000052645ENSMUST00000099130ENSMUST00000149449ENSMUSG00000058174ENSMUST00000079755ENSMUST00000099128ENSMUST00000108105ENSMUST00000134904ENSMUSG00000063001ENSMUST00000077976ENSMUSG00000080723ENSMUST00000119860ENSMUSG00000081093ENSMUST00000119004ENSMUSG00000085677ENSMUST00000129750ENSMUST00000144981ENSMUSG00000087457ENSMUST00000133080ENSMUSG00000097304ENSMUST00000181857ENSMUSG00000100755ENSMUST00000116115
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145375 ENST00000274008 1.419±0.00 0.560±0.00 0.745±0.00 0.428±0.03 1.221±0.00 1.049±0.03 0.606±0.00 0.627±0.38 0.713±0.49 0.773±0.26 0.379±0.28 0.749±0.13 0.622±0.39 2.278±0.13
ENST00000422835 N/A N/A N/A 1.208±0.00 N/A 1.466±0.00 0.472±0.00 2.468±0.00 2.579±0.00 1.502±0.00 1.587±0.00 2.345±1.38 N/A N/A
ENSG00000164056 ENST00000339241 N/A N/A 1.327±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394339 N/A N/A N/A 0.304±0.11 1.570±0.00 N/A 0.395±0.00 N/A 1.453±0.00 1.872±0.00 N/A 1.742±0.00 N/A N/A
ENST00000505319 N/A N/A N/A 0.581±0.00 N/A 1.641±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507703 N/A N/A N/A 0.871±0.00 2.402±0.00 N/A 0.626±0.00 2.011±0.00 N/A 4.227±0.00 1.890±0.00 7.946±6.64 10.443±0.00 8.390±0.00
ENST00000508849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515726 N/A N/A N/A N/A N/A N/A 1.161±0.00 N/A N/A 3.479±0.00 N/A N/A 9.829±0.75 N/A
ENST00000610581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622283 79.045±0.00 18.298±0.00 N/A 0.835±0.00 18.229±13.41 60.324±0.00 7.195±0.00 3.811±1.62 0.743±0.00 30.968±0.00 6.001±1.85 7.668±4.05 10.101±2.54 15.443±9.53
ENSG00000226655 ENST00000439565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.597±0.00 N/A 0.611±0.35
ENSG00000228489 ENST00000417698 N/A 0.081±0.00 N/A N/A N/A 0.082±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.037±0.00
ENSG00000249125 ENST00000503950 0.162±0.00 0.066±0.00 N/A 0.111±0.00 0.271±0.00 0.092±0.00 N/A 0.066±0.00 0.257±0.00 0.287±0.00 N/A 0.120±0.03 0.636±0.19 0.343±0.04
ENSG00000249464 ENST00000508111 N/A N/A N/A N/A 0.990±0.00 0.552±0.00 N/A N/A N/A 0.891±0.00 0.376±0.00 0.588±0.60 0.370±0.00 0.778±0.00
ENST00000511919 N/A N/A N/A 0.272±0.00 N/A 1.743±0.00 0.108±0.00 N/A N/A N/A N/A 0.488±0.22 0.400±0.19 0.347±0.00
ENST00000514823 0.015±0.00 0.040±0.00 N/A 0.016±0.00 0.131±0.00 0.007±0.00 0.028±0.02 N/A 0.008±0.00 0.014±0.00 N/A 0.037±0.02 0.035±0.00 N/A
ENST00000515769 N/A N/A 0.154±0.00 N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A
ENSG00000251526 ENST00000508291 N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A 0.099±0.00 N/A N/A 0.054±0.01 0.174±0.00 0.253±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027722 ENSMUST00000029277 N/A N/A N/A 3.213±1.75 N/A N/A N/A N/A 1.804±0.73 N/A 1.522±0.22 4.796±0.02 7.018±5.09 19.664±15.76
ENSMUST00000108112 1.934±0.00 N/A N/A 1.569±0.14 N/A N/A N/A 1.192±0.00 1.483±0.63 N/A N/A 1.760±0.16 1.737±0.00 4.357±1.09
ENSMUST00000124347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.305±10.19 N/A
ENSMUST00000132958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037211 ENSMUST00000038569 12.584±4.50 10.545±2.45 11.604±0.17 2.985±0.91 7.262±1.46 6.877±0.70 5.184±2.65 9.687±2.63 1.603±1.19 24.250±4.73 4.984±2.37 7.593±3.24 2.681±1.33 N/A
ENSMUST00000108107 3.266±0.65 2.633±0.41 2.934±0.01 1.273±0.04 3.842±0.95 2.496±0.31 1.575±0.00 N/A 0.654±0.38 5.963±0.52 1.348±0.20 3.418±0.83 0.888±0.00 0.312±0.12
ENSMUST00000108109 5.493±2.88 4.302±1.15 4.310±0.24 1.163±0.53 7.264±5.15 3.765±0.62 4.211±0.92 8.595±2.82 1.248±0.95 17.905±5.70 6.401±1.75 6.300±2.14 1.684±0.83 1.088±0.57
ENSMUSG00000037225 ENSMUST00000038885 N/A 5.548±0.00 N/A N/A 11.210±1.70 2.244±0.40 N/A N/A N/A 6.387±1.01 N/A 5.571±1.49 N/A N/A
ENSMUST00000091203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050174 ENSMUST00000052645 5.229±0.00 7.350±1.69 N/A N/A 5.743±2.42 3.640±1.27 8.262±1.13 6.307±2.61 4.755±2.11 3.576±0.00 8.626±0.75 4.262±1.61 N/A N/A
ENSMUST00000099130 6.986±1.70 13.056±3.89 N/A N/A 10.901±1.43 4.876±1.61 7.413±1.00 8.543±2.50 6.258±2.35 4.610±1.42 5.635±0.98 7.099±1.59 N/A N/A
ENSMUST00000108117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149449 N/A 12.349±4.42 N/A N/A N/A 3.573±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058174 ENSMUST00000079755 0.214±0.00 0.517±0.26 N/A 1.514±0.00 0.213±0.12 0.479±0.31 N/A 1.482±0.14 N/A 1.520±0.33 0.037±0.00 0.411±0.14 0.233±0.21 0.027±0.00
ENSMUST00000099128 0.243±0.00 N/A N/A N/A 0.204±0.10 0.186±0.00 0.028±0.00 0.619±0.03 N/A N/A 0.146±0.02 7.118±0.78 5.101±1.73 0.097±0.00
ENSMUST00000108105 N/A 0.586±0.06 0.648±0.00 N/A 0.161±0.00 0.353±0.15 N/A N/A N/A N/A N/A 0.217±0.08 0.297±0.00 N/A
ENSMUST00000134904 0.111±0.07 0.376±0.26 0.720±0.00 0.055±0.00 0.296±0.08 0.589±0.11 0.050±0.03 0.823±0.26 0.177±0.15 1.668±0.13 0.042±0.02 0.576±0.18 0.233±0.22 0.183±0.13
ENSMUSG00000063001 ENSMUST00000077976 N/A N/A N/A N/A N/A N/A N/A N/A 23.698±20.44 N/A 0.957±0.62 N/A N/A N/A
ENSMUSG00000080723 ENSMUST00000119860 0.489±0.25 0.723±0.04 0.051±0.00 N/A 0.773±0.43 0.714±0.01 N/A 0.831±0.36 0.371±0.24 0.412±0.08 N/A 0.971±0.93 0.247±0.00 0.300±0.09
ENSMUSG00000081093 ENSMUST00000119004 N/A N/A 0.015±0.00 0.014±0.00 N/A N/A N/A N/A 0.015±0.01 N/A N/A 0.101±0.00 0.098±0.05 0.081±0.03
ENSMUSG00000085677 ENSMUST00000129750 N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A 5.531±1.43
ENSMUST00000144981 0.107±0.00 N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A 1.020±0.00
ENSMUSG00000087457 ENSMUST00000133080 0.197±0.11 0.364±0.00 0.065±0.04 0.157±0.00 0.491±0.23 N/A N/A 0.176±0.06 N/A 0.316±0.19 N/A 0.551±0.19 0.090±0.00 0.083±0.00
ENSMUSG00000097304 ENSMUST00000181857 0.205±0.00 N/A 0.178±0.10 0.204±0.09 0.494±0.00 0.629±0.00 0.167±0.00 0.150±0.00 0.164±0.06 N/A N/A 0.433±0.12 0.937±1.14 0.926±1.00
ENSMUSG00000100755 ENSMUST00000116115 0.463±0.20 0.261±0.01 11.569±8.39 20.755±1.18 1.068±0.29 1.530±0.35 1.475±0.66 4.248±0.20 17.104±23.35 N/A 1.531±0.82 1.272±0.12 5.690±0.00 3.233±0.22

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