C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099384 Brd9-201 ENSMUSG00000057649 10090 + 13:73937838-73960894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099384 7.261±4.03 3.662±0.94 22.522±0.78 24.226±8.67 6.744±4.22 6.437±1.29 6.588±3.10 5.083±1.38 7.866±5.71 8.423±4.18 2.946±0.70 12.620±8.24 15.298±3.47 18.239±3.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0016568 IEA chromatin modification
GO:0070577 ISS lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000466684 BRD9-003 nonsense_mediated_decay Homo_sapiens 0 732
ENST00000467963 BRD9-001 protein_coding Homo_sapiens 0 1821
ENST00000483173 BRD9-004 protein_coding Homo_sapiens 0 1712
ENST00000489093 BRD9-012 protein_coding Homo_sapiens 0 313
ENST00000489816 BRD9-005 nonsense_mediated_decay Homo_sapiens 0 1157
ENST00000490814 BRD9-006 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000494422 BRD9-013 processed_transcript Homo_sapiens 3e-34 148
ENST00000495265 BRD9-002 nonsense_mediated_decay Homo_sapiens 0 996
ENST00000495794 BRD9-007 retained_intron Homo_sapiens 0 730

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