C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495265 BRD9-002 ENSG00000028310 9606 - 5:863741-892800 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000495265
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000495265 2.101±0.00 4.539±0.00 3.887±0.00 4.760±0.00 2.918±0.00 3.161±0.00 1.136±0.00 3.185±0.00 4.781±0.00 5.287±1.07 2.996±1.60 10.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W3 CIL_0006W3_0002 CGP 5:795606-892824
CIL_0006VW CIL_0006VW_0002 CGP 5:850291-919357

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099384 Brd9-201 protein_coding Mus_musculus 0 996
ENSMUST00000135471 Brd7-003 processed_transcript Mus_musculus 0.00005 55
ENSMUST00000034085 Brd7-001 protein_coding Mus_musculus 0.00005 55

Loading