C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467963 BRD9-001 ENSG00000028310 9606 - 5:864273-892824 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungOvaryPlacentaTestisENST00000467963
Transcript ID Heart Lung Ovary Placenta Testis
ENST00000467963 0.453±0.00 1.981±0.00 10.207±7.22 4.467±2.17 11.873±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W3 CIL_0006W3_0002 CGP 5:795606-892824
CIL_0006VW CIL_0006VW_0002 CGP 5:850291-919357

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 NAS nucleic acid binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0016568 IEA chromatin modification
GO:0070577 IDA lysine-acetylated histone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099384 Brd9-201 protein_coding Mus_musculus 0 1821
ENSMUST00000135471 Brd7-003 processed_transcript Mus_musculus 0.00004 55
ENSMUST00000034085 Brd7-001 protein_coding Mus_musculus 0.00004 55

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