C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100171 Hspa5-001 ENSMUSG00000026864 10090 + 2:34772095-34776531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100171 22.746±1.06 40.996±6.48 13.893±5.74 29.545±6.09 28.075±5.08 31.470±6.98 11.137±0.00 15.754±4.74 32.942±5.12 24.695±5.84 9.189±1.60 77.211±27.50 155.124±7.59 24.838±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005576 TAS extracellular region
GO:0005783 IDA endoplasmic reticulum
GO:0005788 IDA endoplasmic reticulum lumen
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005886 IDA plasma membrane
GO:0006983 IDA ER overload response
GO:0006987 IMP activation of signaling protein activity involved in unfolded protein response
GO:0009986 IDA cell surface
GO:0016020 ISO membrane
GO:0021589 IMP cerebellum structural organization
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0030335 ISS positive regulation of cell migration
GO:0030512 IGI negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031398 IMP positive regulation of protein ubiquitination
GO:0034976 ISO response to endoplasmic reticulum stress
GO:0035437 ISS maintenance of protein localization in endoplasmic reticulum
GO:0040019 TAS positive regulation of embryonic development
GO:0043022 IDA ribosome binding
GO:0051603 IDA proteolysis involved in cellular protein catabolic process
GO:0051787 IDA misfolded protein binding
GO:0071353 IDA cellular response to interleukin-4
GO:1901998 IMP toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010079 hspa5-201 protein_coding Danio_rerio 0 1288
ENST00000324460 HSPA5-001 protein_coding Homo_sapiens 0 3282
ENST00000442006 RP11-334L9.1-001 processed_pseudogene Homo_sapiens 0 2270
ENST00000509378 RP11-39C10.1-001 processed_pseudogene Homo_sapiens 0 2248

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