C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear fragile X mental retardation protein interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000225388 NUFIP2-001 ENSG00000108256 9606 - 17:29255836-29294118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000225388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000225388 5.492±0.00 5.976±0.00 4.322±0.00 6.733±0.54 8.361±3.80 6.155±1.43 4.354±0.02 5.595±1.44 5.791±2.80 8.602±1.98 3.231±1.25 7.785±3.48 6.561±2.15 4.035±1.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016020 IDA membrane
GO:0042788 IDA polysomal ribosome
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100802 Nufip2-001 protein_coding Mus_musculus 0 4024
ENSMUST00000181023 Nufip2-004 protein_coding Mus_musculus 0 3116
ENSMUST00000126942 Nufip2-002 processed_transcript Mus_musculus 0 542
ENSMUST00000155238 Nufip2-003 processed_transcript Mus_musculus 0 272
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.00000009 66
ENSMUST00000140795 Abat-002 retained_intron Mus_musculus 0.00002 58

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