C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATP-binding cassette, sub-family B (MDR/TAP), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100982 Abcb5-002 ENSMUSG00000072791 10090 - 12:118886618-118924580 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000100982
Transcript ID Brain Ovary
ENSMUST00000100982 0.005±0.00 0.114±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T9 CIL_0007T9_0002 VISTA 12:118347247-118948361
CIL_0008JT CIL_0008JT_0002 VISTA 12:118350488-118951732
CIL_0008EN CIL_0008EN_0002 VISTA 12:118402747-119004293
CIL_0008NJ CIL_0008NJ_0002 VISTA 12:118419668-119021135
CIL_0007QC CIL_0007QC_0002 VISTA 12:118425449-119026903
CIL_0007Z1 CIL_0007Z1_0002 VISTA 12:118534480-119136076
CIL_0007YM CIL_0007YM_0002 VISTA 12:118540044-119141444
CIL_0007UH CIL_0007UH_0002 VISTA 12:118543462-119144556

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258738 ABCB5-001 protein_coding Homo_sapiens 0 658
ENST00000404938 ABCB5-004 protein_coding Homo_sapiens 0 658
ENST00000406935 ABCB5-002 protein_coding Homo_sapiens 0 207
ENST00000443026 ABCB5-003 protein_coding Homo_sapiens 0 209

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