C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MyoD family inhibitor domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101663 Mdfic-001 ENSMUSG00000041390 10090 + 6:15720661-15802165 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101663 6.889±1.09 7.322±0.57 2.386±0.83 1.023±0.21 5.312±2.95 2.078±0.79 1.099±0.47 1.826±0.34 1.752±0.51 8.871±4.24 0.639±0.16 13.694±5.74 1.469±0.57 0.115±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000411 CIL_000411_0002 CGP 6:14901349-15802169
CIL_0007K6 CIL_0007K6_0003 UCNEbase 6:14952789-16992593
CIL_0008OY CIL_0008OY_0002 VISTA 6:15135024-15737812
CIL_000814 CIL_000814_0002 VISTA 6:15186410-15787741
CIL_000894 CIL_000894_0002 VISTA 6:15200356-15801750
CIL_00094G CIL_00094G_0002 VISTA 6:15310145-15910753
CIL_000410 CIL_000410_0002 CGP 6:15720661-16898441

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005730 IDA nucleolus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0008134 ISS transcription factor binding
GO:0030332 ISS cyclin binding
GO:0030957 ISS Tat protein binding
GO:0042308 IDA negative regulation of protein import into nucleus
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0050434 ISS positive regulation of viral transcription

Homologs

No Homologs available.

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