C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 7-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102633 Atxn7l2-001 ENSMUSG00000048997 10090 - 3:108202222-108210934 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000102633
Transcript ID Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000102633 0.385±0.00 1.694±0.35 0.216±0.01 0.607±0.07 0.820±0.01 0.484±0.12 0.717±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369869 ATXN7L2-002 retained_intron Homo_sapiens 0 1628
ENST00000369870 ATXN7L2-001 protein_coding Homo_sapiens 0 2191
ENST00000459635 ATXN7L2-005 processed_transcript Homo_sapiens 0 898
ENST00000463678 ATXN7L2-004 nonsense_mediated_decay Homo_sapiens 0 3626
ENST00000497545 ATXN7L2-003 retained_intron Homo_sapiens 0 1395
ENST00000604728 ATXN7L2-006 processed_transcript Homo_sapiens 0 468
ENST00000615509 ATXN7L2-201 protein_coding Homo_sapiens 0 2183

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