C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102769 Mmadhc-001 ENSMUSG00000026766 10090 - 2:50279881-50296717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102769
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102769 21.390±5.02 9.662±0.00 39.214±5.86 22.002±8.48 17.489±13.74 7.204±2.18 33.619±3.87 22.596±5.92 27.029±8.81 10.834±3.57 51.425±5.84 14.864±10.79 27.388±8.69 24.637±12.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E0 CIL_0007E0_0002 CGP 2:50066429-50296801
CIL_0007DZ CIL_0007DZ_0002 CGP 2:50279881-51149111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008150 ND biological_process
GO:0009235 IEA cobalamin metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303319 MMADHC-006 protein_coding Homo_sapiens 0 1147
ENST00000422782 MMADHC-004 protein_coding Homo_sapiens 0 776
ENST00000423224 RP11-322A17.1-001 processed_pseudogene Homo_sapiens 0 298
ENST00000428879 MMADHC-001 protein_coding Homo_sapiens 0 1147
ENST00000531489 RP1-145M24.1-001 processed_pseudogene Homo_sapiens 0 898

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