C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007E0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187123-ENSG00000168288 CGP 9606 2:149329985-149587816
GeneTranscriptPositionBiotype
ENSG00000168288 (MMADHC)
methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
ENST00000303319 (MMADHC-006) 149569634-149587816 protein_coding
ENST00000422782 (MMADHC-004) 149569672-149587778 protein_coding
ENST00000428879 (MMADHC-001) 149569644-149587602 protein_coding
ENST00000460311 (MMADHC-005) 149586889-149587726 processed_transcript
ENSG00000187123 (LYPD6)
LY6/PLAUR domain containing 6
ENST00000334166 (LYPD6-001) 149330537-149474148 protein_coding
ENST00000392854 (LYPD6-004) 149367712-149471110 nonsense_mediated_decay
ENST00000409381 (LYPD6-003) 149329985-149473623 protein_coding
ENST00000414420 (LYPD6-005) 149367701-149449090 protein_coding
ENST00000418762 (LYPD6-002) 149330663-149471095 nonsense_mediated_decay
ENSG00000223604 (AC007394.3)
ENST00000421941 (AC007394.3-001) 149439897-149440427 processed_pseudogene
CIL_0007E0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000050447-ENSMUSG00000026766 CGP 10090 2:50066429-50296801
GeneTranscriptPositionBiotype
ENSMUSG00000026766 (Mmadhc)
methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria
ENSMUST00000102769 (Mmadhc-001) 50279881-50296717 protein_coding
ENSMUST00000133768 (Mmadhc-002) 50287866-50296801 protein_coding
ENSMUST00000134480 (Mmadhc-004) 50280350-50296687 processed_transcript
ENSMUST00000140563 (Mmadhc-005) 50287853-50296676 processed_transcript
ENSMUST00000144143 (Mmadhc-007) 50281141-50296681 protein_coding
ENSMUST00000147345 (Mmadhc-003) 50279881-50296695 processed_transcript
ENSMUST00000152948 (Mmadhc-008) 50281166-50289199 processed_transcript
ENSMUST00000154254 (Mmadhc-006) 50281154-50296423 processed_transcript
ENSMUSG00000050447 (Lypd6)
LY6/PLAUR domain containing 6
ENSMUST00000053208 (Lypd6-001) 50066464-50193564 protein_coding
ENSMUST00000112712 (Lypd6-201) 50066429-50193569 protein_coding
ENSMUST00000126337 (Lypd6-003) 50165401-50173694 protein_coding
ENSMUST00000128451 (Lypd6-002) 50066462-50190670 protein_coding
ENSMUST00000169232 (Lypd6-202) 50128369-50193563 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E0_0001ENSG00000168288ENST00000303319ENST00000422782ENST00000428879ENST00000460311ENSG00000187123ENST00000334166ENST00000392854ENST00000409381ENST00000414420ENST00000418762ENSG00000223604ENST00000421941CIL_0007E0_0002ENSMUSG00000026766ENSMUST00000102769ENSMUST00000133768ENSMUST00000134480ENSMUST00000140563ENSMUST00000144143ENSMUST00000147345ENSMUST00000152948ENSMUST00000154254ENSMUSG00000050447ENSMUST00000053208ENSMUST00000112712ENSMUST00000126337ENSMUST00000128451ENSMUST00000169232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E0_0001ENSG00000168288ENST00000303319ENST00000422782ENST00000428879ENSG00000187123ENST00000334166ENST00000392854ENST00000409381ENST00000414420ENST00000418762ENSG00000223604ENST00000421941CIL_0007E0_0002ENSMUSG00000026766ENSMUST00000102769ENSMUST00000134480ENSMUST00000140563ENSMUST00000144143ENSMUST00000147345ENSMUST00000152948ENSMUSG00000050447ENSMUST00000053208ENSMUST00000112712ENSMUST00000126337ENSMUST00000128451ENSMUST00000169232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168288 ENST00000303319 26.984±0.00 25.965±0.00 7.438±0.00 15.082±4.45 23.561±10.04 24.784±10.38 13.194±3.95 28.657±8.12 20.561±15.46 17.479±4.49 27.430±9.79 40.191±19.46 33.841±6.59 43.490±4.94
ENST00000422782 N/A N/A N/A N/A N/A N/A N/A N/A 10.290±0.00 N/A N/A N/A N/A N/A
ENST00000428879 N/A N/A N/A N/A N/A N/A N/A 4.990±0.00 N/A N/A N/A N/A N/A N/A
ENST00000460311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187123 ENST00000334166 N/A 0.211±0.00 0.113±0.00 0.562±0.13 0.202±0.00 N/A N/A 0.335±0.00 0.222±0.14 0.075±0.00 N/A 0.246±0.10 2.266±0.76 0.183±0.00
ENST00000392854 N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409381 0.091±0.00 0.116±0.00 0.097±0.00 1.275±0.01 0.096±0.04 0.537±0.28 0.062±0.04 N/A 0.192±0.00 0.118±0.00 0.033±0.00 0.270±0.14 2.052±0.36 0.695±0.23
ENST00000414420 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A 0.848±0.00
ENST00000418762 N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.628±0.00 N/A N/A N/A N/A N/A
ENSG00000223604 ENST00000421941 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026766 ENSMUST00000102769 21.390±5.02 9.662±0.00 39.214±5.86 22.002±8.48 17.489±13.74 7.204±2.18 33.619±3.87 22.596±5.92 27.029±8.81 10.834±3.57 51.425±5.84 14.864±10.79 27.388±8.69 24.637±12.17
ENSMUST00000133768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134480 N/A N/A N/A 12.503±0.00 N/A N/A N/A N/A N/A N/A N/A 26.705±0.00 35.763±11.89 116.691±0.00
ENSMUST00000140563 5.479±0.00 26.758±5.51 N/A N/A N/A N/A N/A N/A 8.757±0.00 N/A N/A N/A N/A N/A
ENSMUST00000144143 4.180±0.00 19.355±6.59 N/A N/A 12.875±2.63 11.796±2.75 N/A 4.515±0.00 7.109±2.43 7.431±1.98 N/A 17.046±3.59 9.615±1.64 N/A
ENSMUST00000147345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.072±0.00
ENSMUST00000152948 N/A N/A N/A 31.153±0.00 N/A N/A N/A N/A N/A N/A N/A 65.248±0.00 74.288±10.37 50.349±0.00
ENSMUST00000154254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000050447 ENSMUST00000053208 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.059±0.00 0.061±0.02
ENSMUST00000112712 0.470±0.39 4.527±0.97 0.970±0.24 1.715±0.79 0.251±0.15 0.560±0.28 0.095±0.09 0.914±0.33 0.072±0.04 0.601±0.20 0.291±0.05 0.943±0.38 0.312±0.13 0.154±0.07
ENSMUST00000126337 N/A N/A N/A N/A N/A N/A N/A 3.849±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000128451 1.449±1.25 28.340±4.82 N/A 2.727±0.00 0.926±0.23 1.820±0.69 0.431±0.00 3.099±0.87 0.193±0.05 1.145±0.49 0.609±0.00 4.001±1.76 0.617±0.11 0.744±0.20
ENSMUST00000169232 N/A N/A N/A 0.407±0.00 N/A 0.124±0.01 0.163±0.00 N/A 0.041±0.03 N/A N/A 0.486±0.00 0.121±0.03 0.072±0.00

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