C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth associated protein 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102817 Gap43-001 ENSMUSG00000047261 10090 - 16:42248442-42340651 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102817 2.519±2.42 0.202±0.16 1.221±0.05 324.616±39.87 0.159±0.06 1.970±0.40 0.240±0.05 0.263±0.12 2.819±1.53 5.195±1.33 0.093±0.04 0.308±0.17 3.439±2.63 0.052±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0007399 IEA nervous system development
GO:0007411 IMP axon guidance
GO:0010001 IMP glial cell differentiation
GO:0014069 IDA postsynaptic density
GO:0016198 IMP axon choice point recognition
GO:0030054 IEA cell junction
GO:0030424 IDA axon
GO:0031527 IEA filopodium membrane
GO:0040008 IEA regulation of growth
GO:0042246 IEA tissue regeneration
GO:0045165 IMP cell fate commitment
GO:0051489 IEA regulation of filopodium assembly
GO:0071944 IDA cell periphery

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305124 GAP43-001 protein_coding Homo_sapiens 0 1096
ENST00000393780 GAP43-002 protein_coding Homo_sapiens 0 1096

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