C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: malate dehydrogenase 1, NAD (soluble)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102874 Mdh1-001 ENSMUSG00000020321 10090 - 11:21556787-21572193 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102874
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102874 145.066±35.11 52.005±9.91 65.817±19.96 36.447±13.41 182.526±79.49 73.024±11.94 818.067±77.33 493.099±132.14 113.549±75.53 65.156±15.43 49.939±11.58 57.988±17.92 57.406±65.36 16.602±2.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005813 IEA centrosome
GO:0006099 IEA tricarboxylic acid cycle
GO:0006107 IEA oxaloacetate metabolic process
GO:0006734 IEA NADH metabolic process
GO:0019674 IEA NAD metabolic process
GO:0030060 IEA L-malate dehydrogenase activity
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233114 MDH1-001 protein_coding Homo_sapiens 0 1437
ENST00000409476 MDH1-011 protein_coding Homo_sapiens 0 830
ENST00000409908 MDH1-010 protein_coding Homo_sapiens 0 678
ENST00000416450 RP1-49C23.1-001 processed_pseudogene Homo_sapiens 0 686
ENST00000421012 MDH1-009 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000432309 MDH1-003 protein_coding Homo_sapiens 0 837
ENST00000436321 MDH1-004 protein_coding Homo_sapiens 0 665
ENST00000442225 MDH1-006 protein_coding Homo_sapiens 0 307
ENST00000454035 MDH1-007 protein_coding Homo_sapiens 0 483
ENST00000472098 MDH1-002 retained_intron Homo_sapiens 0 226
ENST00000485155 MDH1-008 retained_intron Homo_sapiens 0 204
ENST00000485781 MDH1-012 retained_intron Homo_sapiens 0 592
ENST00000495083 MDH1-014 retained_intron Homo_sapiens 0 322
ENST00000539945 MDH1-201 protein_coding Homo_sapiens 0 1369
ENST00000544381 MDH1-202 protein_coding Homo_sapiens 0 1066

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