C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: malate dehydrogenase 1, NAD (soluble)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409476 MDH1-011 ENSG00000014641 9606 + 2:63588973-63607091 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409476
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409476 12.858±0.00 26.373±0.00 77.351±0.00 43.637±0.00 27.373±0.00 195.350±0.00 63.129±0.00 30.532±0.00 19.426±0.00 17.773±0.00 50.879±0.00 33.883±0.00 28.328±3.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000100 CIL_000100_0002 CGP 2:63050057-63827843
CIL_000105 CIL_000105_0002 CGP 2:63588609-63891562

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005975 IEA carbohydrate metabolic process
GO:0006108 IEA malate metabolic process
GO:0016615 IEA malate dehydrogenase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102874 Mdh1-001 protein_coding Mus_musculus 0 830
ENSMUST00000144978 Mdh1-003 processed_transcript Mus_musculus 0 385
ENSMUST00000146146 Mdh1-004 processed_transcript Mus_musculus 0 239

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