C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523985 CCNC-008 ENSG00000112237 9606 - 6:99543475-99568660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000523985
Transcript ID Kidney Ovary Placenta Testis
ENST00000523985 5.002±0.00 8.934±0.00 12.377±0.00 6.346±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006351 TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007219 TAS Notch signaling pathway
GO:0010467 TAS gene expression
GO:0016591 IEA DNA-directed RNA polymerase II, holoenzyme
GO:0019901 IEA protein kinase binding
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102997 Ccnc-004 protein_coding Mus_musculus 0 1173
ENSMUST00000133712 Ccnc-006 processed_transcript Mus_musculus 0 1040
ENSMUST00000108240 Ccnc-005 protein_coding Mus_musculus 0 994
ENSMUST00000120679 Ccnc-008 protein_coding Mus_musculus 0 994
ENSMUST00000065928 Ccnc-001 protein_coding Mus_musculus 0 994
ENSMUST00000123294 Ccnc-007 processed_transcript Mus_musculus 0 968
ENSMUST00000133597 Ccnc-002 processed_transcript Mus_musculus 0 327
ENSMUST00000145288 Ccnc-003 processed_transcript Mus_musculus 0 255

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