C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin-specific chaperone d
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103013 Tbcd-001 ENSMUSG00000039230 10090 + 11:121451949-121617164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103013
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103013 14.010±0.22 8.892±0.59 11.912±0.06 17.190±6.94 9.092±0.76 8.941±1.58 3.042±0.60 7.368±0.37 7.811±3.97 9.557±0.78 3.580±0.27 13.035±3.19 11.407±2.10 3.911±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043Z CIL_00043Z_0003 CGP 11:121434913-121617164
CIL_00025M CIL_00025M_0003 CGP 11:121451949-121617164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 ISS GTPase activator activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005912 ISS adherens junction
GO:0005923 ISS tight junction
GO:0006457 ISS protein folding
GO:0007023 ISS post-chaperonin tubulin folding pathway
GO:0010812 ISS negative regulation of cell-substrate adhesion
GO:0016328 ISS lateral plasma membrane
GO:0031115 ISS negative regulation of microtubule polymerization
GO:0034333 ISS adherens junction assembly
GO:0043547 ISS positive regulation of GTPase activity
GO:0048487 ISS beta-tubulin binding
GO:0070830 ISS tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355528 TBCD-001 protein_coding Homo_sapiens 0 2802
ENST00000539345 TBCD-005 protein_coding Homo_sapiens 0 2606

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