C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin folding cofactor D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355528 TBCD-001 ENSG00000141556 9606 + 17:82752064-82942848 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355528
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355528 5.982±0.00 8.035±0.00 0.749±0.00 4.233±1.73 2.308±0.00 3.000±1.28 2.078±1.55 3.534±2.84 3.173±1.63 1.326±0.00 2.888±0.00 8.644±5.11 13.655±6.29 9.071±2.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043Z CIL_00043Z_0002 CGP 17:82735575-82942848
CIL_00025M CIL_00025M_0002 CGP 17:82752064-82942848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IMP GTPase activator activity
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005874 TAS microtubule
GO:0005912 ISS adherens junction
GO:0005923 ISS tight junction
GO:0006457 IDA protein folding
GO:0007023 IDA post-chaperonin tubulin folding pathway
GO:0010812 ISS negative regulation of cell-substrate adhesion
GO:0016328 ISS lateral plasma membrane
GO:0031115 IDA negative regulation of microtubule polymerization
GO:0034333 ISS adherens junction assembly
GO:0043547 IEA positive regulation of GTPase activity
GO:0044267 TAS cellular protein metabolic process
GO:0048487 IDA beta-tubulin binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051087 TAS chaperone binding
GO:0070830 ISS tight junction assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103013 Tbcd-001 protein_coding Mus_musculus 0 2802

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