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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transmembrane channel-like gene family 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000103025  |
Tmc6-002 |
ENSMUSG00000025572 |
10090 | - |
11:117775357-117780621  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0002 | VISTA | 11:117565410-118167678 |
| CIL_00009V | CIL_00009V_0002 | CGP | 11:117654289-117782198 |
| CIL_0000A9 | CIL_0000A9_0002 | CGP | 11:117765988-117793110 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005783 | IEA | endoplasmic reticulum |
| GO:0006811 | IEA | ion transport |
| GO:0008150 | ND | biological_process |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000306591
|
TMC6-026 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000322914
|
TMC6-002 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000392467
|
TMC6-001 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000586126
|
TMC6-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 206 |
|
ENST00000586697
|
TMC6-017 | retained_intron | Homo_sapiens | 0.0000000000006 | 79 |
|
ENST00000588087
|
TMC6-006 | retained_intron | Homo_sapiens | 0 | 529 |
|
ENST00000588792
|
TMC6-005 | retained_intron | Homo_sapiens | 1e-25 | 121 |
|
ENST00000589271
|
TMC6-015 | protein_coding | Homo_sapiens | 0 | 516 |
|
ENST00000589553
|
TMC6-003 | protein_coding | Homo_sapiens | 0 | 278 |
|
ENST00000590162
|
TMC6-013 | retained_intron | Homo_sapiens | 9e-26 | 121 |
|
ENST00000590602
|
TMC6-007 | protein_coding | Homo_sapiens | 0 | 529 |
|
ENST00000591594
|
TMC6-020 | retained_intron | Homo_sapiens | 0 | 307 |
|
ENST00000592063
|
TMC6-016 | protein_coding | Homo_sapiens | 0 | 291 |
|
ENST00000592594
|
TMC6-010 | protein_coding | Homo_sapiens | 0 | 263 |
|
ENST00000593044
|
TMC6-004 | retained_intron | Homo_sapiens | 5e-25 | 121 |
