C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stathmin-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103045 Stmn3-001 ENSMUSG00000027581 10090 - 2:181306459-181314500 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103045 0.272±0.16 3.681±1.52 0.625±0.01 281.655±53.82 0.100±0.05 3.008±0.53 0.407±0.21 0.665±0.45 0.239±0.43 0.056±0.02 0.084±0.04 0.168±0.10 0.196±0.12 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004EX CIL_0004EX_0002 CGP 2:181251449-181314500
CIL_0003U1 CIL_0003U1_0002 CGP 2:181306459-181356616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0015631 IEA tubulin binding
GO:0019904 IPI protein domain specific binding
GO:0031110 IEA regulation of microtubule polymerization or depolymerization
GO:0031122 IDA cytoplasmic microtubule organization
GO:0031175 IDA neuron projection development
GO:0032314 IDA regulation of Rac GTPase activity
GO:0035021 IDA negative regulation of Rac protein signal transduction
GO:0042995 IEA cell projection
GO:0051493 IDA regulation of cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370053 STMN3-001 protein_coding Homo_sapiens 0 725
ENST00000540534 STMN3-201 protein_coding Homo_sapiens 0 665

Loading