C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103101 Pigt-001 ENSMUSG00000017721 10090 + 2:164497520-164508301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103101
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103101 39.816±5.71 69.703±3.76 29.429±1.55 31.089±16.51 40.751±15.33 66.949±4.96 14.629±2.50 36.793±4.50 18.883±3.78 33.713±0.78 11.166±0.81 66.143±19.70 26.485±12.08 26.496±11.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003L0 CIL_0003L0_0002 CGP 2:164486106-164508301
CIL_0006IJ CIL_0006IJ_0002 CGP 2:164497520-164568510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003923 IMP GPI-anchor transamidase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0016020 IEA membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0016255 TAS attachment of GPI anchor to protein
GO:0030182 IDA neuron differentiation
GO:0042765 IDA GPI-anchor transamidase complex
GO:0051402 IDA neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279035 PIGT-004 protein_coding Homo_sapiens 0 1459
ENST00000279036 PIGT-001 protein_coding Homo_sapiens 0 2019
ENST00000372689 PIGT-005 protein_coding Homo_sapiens 0 1147
ENST00000455050 PIGT-006 nonsense_mediated_decay Homo_sapiens 0 1330
ENST00000543458 PIGT-007 protein_coding Homo_sapiens 0 1459
ENST00000545755 PIGT-008 protein_coding Homo_sapiens 0 669

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