C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin heavy variable 5-12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103450 Ighv5-12-201 ENSMUSG00000095429 10090 - 12:113702124-113702578 IG_LV_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleTestisENSMUST00000103450
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Testis
ENSMUST00000103450 0.421±0.05 2.603±1.45 6.472±6.94 0.158±0.00 0.398±0.15 0.297±0.20 1.026±0.57 0.379±0.00 0.178±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000390598 IGHV3-7-001 IG_V_gene Homo_sapiens 0 305
ENST00000390601 IGHV3-11-001 IG_V_gene Homo_sapiens 0 333
ENST00000390603 IGHV3-15-001 IG_V_gene Homo_sapiens 0 239
ENST00000390606 IGHV3-20-001 IG_V_gene Homo_sapiens 0 305
ENST00000390607 IGHV3-21-001 IG_V_gene Homo_sapiens 0 322
ENST00000390615 IGHV3-33-001 IG_V_gene Homo_sapiens 0 283
ENST00000390621 IGHV1-45-001 IG_V_gene Homo_sapiens 0.000000003 66
ENST00000390624 IGHV3-48-001 IG_V_gene Homo_sapiens 0 339
ENST00000390627 IGHV3-53-001 IG_V_gene Homo_sapiens 0 294
ENST00000390632 IGHV3-66-001 IG_V_gene Homo_sapiens 0 302
ENST00000390636 IGHV3-73-001 IG_V_gene Homo_sapiens 0 200
ENST00000424969 IGHV3-74-001 IG_V_gene Homo_sapiens 0 316
ENST00000425181 IGHV3OR16-10-001 IG_V_gene Homo_sapiens 0 292
ENST00000426099 RP11-1166P10.8-001 unprocessed_pseudogene Homo_sapiens 0 279
ENST00000434710 IGHV3-43-001 IG_V_gene Homo_sapiens 0 307
ENST00000520057 IGHV3-62-001 IG_V_pseudogene Homo_sapiens 0 246
ENST00000521678 IGHV3-60-001 IG_V_pseudogene Homo_sapiens 0 252
ENST00000562905 IGHV3OR16-13-001 IG_V_gene Homo_sapiens 0 311
ENST00000565524 IGHV3OR16-11-001 IG_V_pseudogene Homo_sapiens 0 287
ENST00000568775 IGHV3OR16-6-001 IG_V_pseudogene Homo_sapiens 0 209
ENST00000603660 IGHV3-30-001 IG_V_gene Homo_sapiens 0 292
ENST00000604106 IGHV3OR16-7-001 IG_V_pseudogene Homo_sapiens 0 196
ENST00000611989 AC245369.1-201 protein_coding Homo_sapiens 3e-37 158
ENST00000612243 AC136616.2-201 protein_coding Homo_sapiens 0 204
ENST00000613158 IGHG1-210 protein_coding Homo_sapiens 0 289
ENST00000613516 IGHM-202 IG_C_gene Homo_sapiens 0 327
ENST00000614110 AC136616.2-202 protein_coding Homo_sapiens 2e-38 161
ENST00000615655 IGHG1-211 protein_coding Homo_sapiens 0 327
ENST00000615784 AC244452.2-201 protein_coding Homo_sapiens 0.000000003 66
ENST00000615822 IGHG1-203 IG_C_gene Homo_sapiens 0 305
ENST00000616331 IGHG1-213 protein_coding Homo_sapiens 0 305
ENST00000618085 IGHV3-64-201 IG_V_gene Homo_sapiens 3e-37 158
ENST00000619212 IGHG1-206 IG_C_gene Homo_sapiens 0 289

Loading