C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin heavy variable 3-15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000390603 IGHV3-15-001 ENSG00000211943 9606 - 14:106153624-106154163 IG_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000390603
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000390603 0.731±0.00 1.021±0.00 0.096±0.00 9.195±1.60 5.577±0.60 1.280±0.00 4.748±0.00 0.353±0.00 10.108±0.00 0.302±0.00 25.946±22.22 0.178±0.01 0.365±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103459 Ighv5-17-201 IG_LV_gene Mus_musculus 0 292
ENSMUST00000103448 Ighv5-9-201 IG_LV_gene Mus_musculus 0 261
ENSMUST00000103444 Ighv5-4-201 IG_LV_gene Mus_musculus 0 250
ENSMUST00000103446 Ighv5-6-201 IG_LV_gene Mus_musculus 0 244
ENSMUST00000103450 Ighv5-12-201 IG_LV_gene Mus_musculus 0 239
ENSMUST00000103452 Ighv5-9-1-201 IG_LV_gene Mus_musculus 0 222
ENSMUST00000103457 Ighv5-15-201 IG_LV_gene Mus_musculus 0 187
ENSMUST00000103442 Ighv5-2-201 IG_LV_gene Mus_musculus 6e-32 141
ENSMUST00000177949 Ighv6-4-201 protein_coding Mus_musculus 2e-31 139

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