C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612243 AC136616.2-201 ENSG00000277761 9606 + KI270728.1:1167457-1209276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000612243
Transcript ID Colon
ENST00000612243 0.119±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013B CIL_00013B_0002 CGP KI270728.1:1167457-1271271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103459 Ighv5-17-201 IG_LV_gene Mus_musculus 0 230
ENSMUST00000103450 Ighv5-12-201 IG_LV_gene Mus_musculus 0 204
ENSMUST00000103446 Ighv5-6-201 IG_LV_gene Mus_musculus 0 202
ENSMUST00000103457 Ighv5-15-201 IG_LV_gene Mus_musculus 0 193
ENSMUST00000103452 Ighv5-9-1-201 IG_LV_gene Mus_musculus 0 187
ENSMUST00000103448 Ighv5-9-201 IG_LV_gene Mus_musculus 2.99878e-43 178
ENSMUST00000103444 Ighv5-4-201 IG_LV_gene Mus_musculus 2e-40 169
ENSMUST00000177949 Ighv6-4-201 protein_coding Mus_musculus 3e-28 128
ENSMUST00000103442 Ighv5-2-201 IG_LV_gene Mus_musculus 3e-23 111

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