C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2178
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000104927 Gm2178-201 ENSMUSG00000078128 10090 + 14:26514554-26514910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000104927
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000104927 0.540±0.30 0.496±0.16 0.130±0.00 0.655±0.51 0.497±0.18 0.816±0.00 0.276±0.07 0.329±0.15 0.628±0.17 0.616±0.28 0.469±0.00 0.365±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394665 RPL34-002 protein_coding Homo_sapiens 0 363
ENST00000394667 RPL34-001 protein_coding Homo_sapiens 0 363
ENST00000394668 RPL34-003 protein_coding Homo_sapiens 0 363
ENST00000406943 RP11-480N24.4-001 processed_pseudogene Homo_sapiens 0 254
ENST00000407959 RP1-182O16.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000428810 RPL34P27-001 processed_pseudogene Homo_sapiens 0 305
ENST00000431295 RP11-422P24.9-001 processed_pseudogene Homo_sapiens 0 191
ENST00000431514 RP11-487E1.2-001 processed_pseudogene Homo_sapiens 7e-25 115
ENST00000432390 RPL34P6-001 processed_pseudogene Homo_sapiens 0 309
ENST00000445636 RPL34P26-001 processed_pseudogene Homo_sapiens 0 278
ENST00000450455 RPL34P1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000465389 RPL34P34-001 processed_pseudogene Homo_sapiens 0 274
ENST00000466433 RPL34P18-001 processed_pseudogene Homo_sapiens 0 279
ENST00000466686 RP1-181J22.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000475295 RPL34P31-001 processed_pseudogene Homo_sapiens 0 248
ENST00000487566 RPL34P21-001 processed_pseudogene Homo_sapiens 4e-17 92
ENST00000502534 RPL34-006 protein_coding Homo_sapiens 0 363
ENST00000503574 RPL34-004 retained_intron Homo_sapiens 0 211
ENST00000504231 RPL34-007 retained_intron Homo_sapiens 8e-27 124
ENST00000506397 RPL34-005 protein_coding Homo_sapiens 0 363
ENST00000508378 RP11-612J15.3-001 processed_pseudogene Homo_sapiens 2e-40 169
ENST00000605401 RP11-101P17.14-001 processed_pseudogene Homo_sapiens 3e-23 110

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