C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain, small subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000104947 Capns2-001 ENSMUSG00000078144 10090 + 8:92901407-92902407 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000104947
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000104947 0.169±0.18 0.251±0.00 0.585±0.14 0.582±0.32 1.045±0.87 0.196±0.12 0.071±0.00 0.073±0.05 0.066±0.04 3.682±2.57 0.214±0.18 0.342±0.22 0.089±0.02 1.018±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WY CIL_0007WY_0002 VISTA 8:92348089-92949598
CIL_000988 CIL_000988_0002 VISTA 8:92435258-93036114
CIL_00098D CIL_00098D_0002 VISTA 8:92442867-93044200
CIL_0005P6 CIL_0005P6_0002 CGP 8:92827328-92919279
CIL_0000PT CIL_0000PT_0002 CGP 8:92855350-92919279
CIL_0005R5 CIL_0005R5_0002 CGP 8:92901407-93001667

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005737 IBA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006508 IBA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000457326 CAPNS2-001 protein_coding Homo_sapiens 0 845

Loading