C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105584 Acap3-201 ENSMUSG00000029033 10090 + 4:155891822-155907250 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105584 9.616±0.62 8.213±1.11 8.070±0.09 29.291±8.89 7.965±2.81 6.589±0.90 3.973±0.64 3.642±0.23 3.226±2.05 11.190±0.74 2.644±0.30 6.058±2.40 3.325±0.96 2.998±1.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008060 IEA ARF GTPase activator activity
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000047529 acap3b-201 protein_coding Danio_rerio 0 641
ENST00000353662 ACAP3-201 protein_coding Homo_sapiens 0 1975
ENST00000354700 ACAP3-001 protein_coding Homo_sapiens 0 2784
ENST00000354980 ACAP3-012 nonsense_mediated_decay Homo_sapiens 0 588
ENST00000467278 ACAP3-003 retained_intron Homo_sapiens 0 1762
ENST00000472541 ACAP3-002 retained_intron Homo_sapiens 0 861
ENST00000478065 ACAP3-007 retained_intron Homo_sapiens 0 298
ENST00000479108 ACAP3-006 retained_intron Homo_sapiens 0 424
ENST00000492936 ACAP3-004 retained_intron Homo_sapiens 0 2056

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