C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splA/ryanodine receptor domain and SOCS box containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105684 Spsb1-009 ENSMUSG00000039911 10090 - 4:149898214-149907289 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000105684
Transcript ID Testis
ENSMUST00000105684 3.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0002 VISTA 4:149592945-150194331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328089 SPSB1-001 protein_coding Homo_sapiens 0 1072
ENST00000357898 SPSB1-003 protein_coding Homo_sapiens 0 1072
ENST00000377399 SPSB1-002 protein_coding Homo_sapiens 0 1085
ENST00000450402 SPSB1-004 protein_coding Homo_sapiens 0 811

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