C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splA/ryanodine receptor domain and SOCS box containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328089 SPSB1-001 ENSG00000171621 9606 + 1:9292880-9369532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328089 20.001±0.00 7.090±0.00 0.624±0.00 6.039±0.00 7.313±4.98 6.019±4.26 1.982±1.74 11.442±0.00 4.756±3.09 10.306±9.54 15.679±0.00 10.663±6.24 8.629±2.67 6.056±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VW CIL_0008VW_0001 VISTA 1:9071068-9672775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038562 Spsb1-001 protein_coding Mus_musculus 0 1186
ENSMUST00000105685 Spsb1-002 protein_coding Mus_musculus 0 1094
ENSMUST00000105684 Spsb1-009 protein_coding Mus_musculus 0 1072
ENSMUST00000156897 Spsb1-003 protein_coding Mus_musculus 0 809
ENSMUST00000167342 Spsb1-010 protein_coding Mus_musculus 0 239
ENSMUST00000149360 Spsb1-006 protein_coding Mus_musculus 0 233

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