C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2 domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105823 Sh2d5-001 ENSMUSG00000045349 10090 + 4:138250464-138261332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000105823
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000105823 0.570±0.16 0.062±0.00 5.191±0.00 0.400±0.17 0.315±0.14 0.089±0.00 0.028±0.00 0.140±0.12 0.070±0.02 1.191±0.39 0.356±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332
CIL_0003WM CIL_0003WM_0002 CGP 4:138250403-138301967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375031 SH2D5-001 protein_coding Homo_sapiens 0 1153
ENST00000444387 SH2D5-003 protein_coding Homo_sapiens 0 1262
ENST00000460804 SH2D5-002 processed_transcript Homo_sapiens 0 651

Loading