C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH2 domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105824 Sh2d5-002 ENSMUSG00000045349 10090 + 4:138250403-138261332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000105824
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000105824 0.202±0.01 0.804±0.34 0.098±0.00 5.696±1.90 0.236±0.12 0.038±0.01 0.062±0.02 0.235±0.24 0.061±0.01 0.032±0.03 1.042±0.25 1.224±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020H CIL_00020H_0002 CGP 4:138216296-138261332
CIL_0003WM CIL_0003WM_0002 CGP 4:138250403-138301967

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375031 SH2D5-001 protein_coding Homo_sapiens 0 1153
ENST00000444387 SH2D5-003 protein_coding Homo_sapiens 0 1264
ENST00000460804 SH2D5-002 processed_transcript Homo_sapiens 0 651

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