C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105839 Usp48-003 ENSMUSG00000043411 10090 + 4:137594207-137625291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000105839
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000105839 5.984±0.00 19.385±0.61 11.153±0.00 10.172±1.18 8.778±1.85 2.416±0.74 7.704±0.70 23.031±8.22 33.399±9.19 11.801±7.72

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0006511 IEA ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308271 USP48-001 protein_coding Homo_sapiens 0 2254
ENST00000374730 USP48-012 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000374732 USP48-002 protein_coding Homo_sapiens 0 503
ENST00000400301 USP48-201 protein_coding Homo_sapiens 0 2254
ENST00000421625 USP48-006 protein_coding Homo_sapiens 0 1766
ENST00000487880 USP48-016 processed_transcript Homo_sapiens 0 484
ENST00000489108 USP48-005 processed_transcript Homo_sapiens 0 357
ENST00000526044 USP48-013 protein_coding Homo_sapiens 0 616
ENST00000529637 USP48-009 protein_coding Homo_sapiens 0 2187
ENST00000532737 USP48-010 protein_coding Homo_sapiens 0 527
ENST00000534705 USP48-014 protein_coding Homo_sapiens 0 507

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