C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Parkinson disease 7 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106008 Pddc1-001 ENSMUSG00000051007 10090 - 7:141408184-141414136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106008
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106008 35.079±1.95 40.006±5.45 17.401±8.69 18.596±8.60 32.719±12.55 41.445±3.47 8.943±0.78 29.899±2.91 17.105±4.94 30.656±4.34 3.101±0.40 54.054±24.52 17.067±4.84 10.131±5.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OK CIL_0003OK_0002 CGP 7:141392199-141414136
CIL_0003OJ CIL_0003OJ_0002 CGP 7:141408135-141429491

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319863 PDDC1-003 protein_coding Homo_sapiens 0 710
ENST00000397472 PDDC1-006 protein_coding Homo_sapiens 0 586
ENST00000526325 PDDC1-016 protein_coding Homo_sapiens 0 534
ENST00000526650 PDDC1-017 protein_coding Homo_sapiens 0 318
ENST00000528309 PDDC1-012 protein_coding Homo_sapiens 0 368
ENST00000528602 PDDC1-008 retained_intron Homo_sapiens 0 436
ENST00000529966 PDDC1-018 processed_transcript Homo_sapiens 0 425
ENST00000532320 PDDC1-004 retained_intron Homo_sapiens 0 425
ENST00000532839 PDDC1-015 processed_transcript Homo_sapiens 0 499
ENST00000534603 PDDC1-005 nonsense_mediated_decay Homo_sapiens 0 436

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