C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: family with sequence similarity 53, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106168 Fam53b-008 ENSMUSG00000030956 10090 - 7:132713365-132776916 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryENSMUST00000106168
Transcript ID Breast Liver Muscle Ovary
ENSMUST00000106168 2.637±0.00 4.437±0.76 1.533±0.28 4.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00084V CIL_00084V_0002 VISTA 7:132507589-133108550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280780 FAM53B-003 protein_coding Homo_sapiens 0 959
ENST00000337318 FAM53B-001 protein_coding Homo_sapiens 0 1249
ENST00000392754 FAM53B-004 protein_coding Homo_sapiens 0 1249
ENST00000494792 RP11-12J10.3-001 nonsense_mediated_decay Homo_sapiens 0 957

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