C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1810043H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106223 1810043H04Rik-001 ENSMUSG00000078572 10090 + 11:120098928-120100705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106223 7.989±0.85 22.641±3.66 8.812±6.63 8.872±2.87 10.704±6.38 26.482±6.85 5.850±3.67 15.867±3.60 15.557±2.96 10.663±2.47 6.486±1.42 17.291±7.87 4.409±3.24 15.998±6.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003U4 CIL_0003U4_0003 CGP 11:120090531-120100705
CIL_00043W CIL_00043W_0003 CGP 11:120098928-120151346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000431388 C17orf89-001 protein_coding Homo_sapiens 0 243
ENST00000573090 C17orf89-005 retained_intron Homo_sapiens 0 219
ENST00000575067 C17orf89-003 processed_transcript Homo_sapiens 0.0000000004 68
ENST00000576002 C17orf89-002 protein_coding Homo_sapiens 2e-20 102
ENST00000577158 C17orf89-007 processed_transcript Homo_sapiens 2e-29 132
ENST00000605837 RP11-396C23.3-001 processed_pseudogene Homo_sapiens 6e-23 110

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