C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1q and tumor necrosis factor related protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106286 C1qtnf1-001 ENSMUSG00000017446 10090 + 11:118433853-118449963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleENSMUST00000106286
Transcript ID Colon Muscle
ENSMUST00000106286 1.300±0.00 0.530±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063Q CIL_00063Q_0002 CGP 11:118406289-118449963
CIL_00003F CIL_00003F_0002 CGP 11:118428203-118489209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005581 IEA collagen trimer
GO:0005615 IDA extracellular space
GO:0010906 IDA regulation of glucose metabolic process
GO:0043410 IDA positive regulation of MAPK cascade
GO:0051260 IDA protein homooligomerization
GO:0051897 IDA positive regulation of protein kinase B signaling
GO:0070208 IPI protein heterotrimerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311661 C1QTNF1-002 protein_coding Homo_sapiens 0 660
ENST00000339142 C1QTNF1-004 protein_coding Homo_sapiens 0 745
ENST00000354124 C1QTNF1-201 protein_coding Homo_sapiens 0 745
ENST00000392445 C1QTNF1-003 protein_coding Homo_sapiens 0 745
ENST00000578229 C1QTNF1-006 protein_coding Homo_sapiens 0 745
ENST00000579760 C1QTNF1-001 protein_coding Homo_sapiens 0 745
ENST00000580454 C1QTNF1-007 protein_coding Homo_sapiens 0 745
ENST00000580474 C1QTNF1-005 protein_coding Homo_sapiens 0 745
ENST00000581774 C1QTNF1-009 protein_coding Homo_sapiens 0 745
ENST00000582625 C1QTNF1-011 processed_transcript Homo_sapiens 0 621
ENST00000583904 C1QTNF1-010 protein_coding Homo_sapiens 0 745

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