C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium/calmodulin-dependent protein kinase II, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106402 Camk2d-002 ENSMUSG00000053819 10090 + 3:126596951-126844913 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000106402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000106402 8.820±0.01 28.954±11.06 17.146±0.14 9.477±0.39 5.508±1.55 12.407±2.78 5.107±0.36 3.229±1.48 0.820±0.14 9.254±0.25 2.861±0.60 14.801±6.48 2.422±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FA CIL_0000FA_0002 CGP 3:126363827-126844913
CIL_00038U CIL_00038U_0002 CGP 3:126596302-127499259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0002028 IDA regulation of sodium ion transport
GO:0004674 IMP protein serine/threonine kinase activity
GO:0004683 ISS calmodulin-dependent protein kinase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005954 TAS calcium- and calmodulin-dependent protein kinase complex
GO:0006468 ISS protein phosphorylation
GO:0006816 IMP calcium ion transport
GO:0010613 ISS positive regulation of cardiac muscle hypertrophy
GO:0014704 IDA intercalated disc
GO:0016529 IDA sarcoplasmic reticulum
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 ISS peptidyl-threonine phosphorylation
GO:0030315 IDA T-tubule
GO:0031594 IDA neuromuscular junction
GO:0034704 IDA calcium channel complex
GO:0043025 IDA neuronal cell body
GO:0043194 IDA axon initial segment
GO:0044325 IPI ion channel binding
GO:0046777 IMP protein autophosphorylation
GO:0055119 ISS relaxation of cardiac muscle
GO:0060048 IDA cardiac muscle contraction
GO:0060341 ISS regulation of cellular localization
GO:0086003 ISS cardiac muscle cell contraction
GO:1901897 IGI regulation of relaxation of cardiac muscle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296402 CAMK2D-201 protein_coding Homo_sapiens 0 1458
ENST00000342666 CAMK2D-003 protein_coding Homo_sapiens 0 1375
ENST00000379773 CAMK2D-002 protein_coding Homo_sapiens 0 1375
ENST00000394522 CAMK2D-004 protein_coding Homo_sapiens 0 1458
ENST00000394524 CAMK2D-001 protein_coding Homo_sapiens 0 1458
ENST00000505132 CAMK2D-014 retained_intron Homo_sapiens 0 329
ENST00000505990 CAMK2D-005 protein_coding Homo_sapiens 0 2030
ENST00000508738 CAMK2D-006 protein_coding Homo_sapiens 0 1376
ENST00000509594 CAMK2D-016 protein_coding Homo_sapiens 0 473
ENST00000509907 CAMK2D-015 processed_transcript Homo_sapiens 0 329
ENST00000511664 CAMK2D-008 protein_coding Homo_sapiens 0 2071
ENST00000513132 CAMK2D-013 protein_coding Homo_sapiens 0 577
ENST00000514328 CAMK2D-012 protein_coding Homo_sapiens 0 1354
ENST00000515496 CAMK2D-009 protein_coding Homo_sapiens 0 1376

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