C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5',3'-nucleotidase, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106530 Nt5c-003 ENSMUSG00000020736 10090 - 11:115490420-115491815 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_00008L CIL_00008L_0002 CGP 11:115462474-115490467
CIL_0001FZ CIL_0001FZ_0002 CGP 11:115475667-115491862
CIL_0001JI CIL_0001JI_0002 CGP 11:115490420-115514387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008253 IDA 5'-nucleotidase activity
GO:0009264 IDA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation
GO:0016791 IDA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245552 NT5C-001 protein_coding Homo_sapiens 0 566
ENST00000577523 NT5C-012 retained_intron Homo_sapiens 0 296
ENST00000578095 NT5C-016 retained_intron Homo_sapiens 0 285
ENST00000578337 NT5C-009 protein_coding Homo_sapiens 1e-29 134
ENST00000578407 NT5C-014 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000579023 NT5C-006 retained_intron Homo_sapiens 0 285
ENST00000579082 NT5C-007 processed_transcript Homo_sapiens 0 351
ENST00000580423 NT5C-010 protein_coding Homo_sapiens 0 189
ENST00000580758 NT5C-003 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000582160 NT5C-013 protein_coding Homo_sapiens 0 388
ENST00000582170 NT5C-015 protein_coding Homo_sapiens 0 490
ENST00000582744 NT5C-008 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000583655 NT5C-002 retained_intron Homo_sapiens 0 224
ENST00000584352 NT5C-011 retained_intron Homo_sapiens 0 219

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