C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MICAL C-terminal like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106645 Micalcl-003 ENSMUSG00000030771 10090 + 7:112374868-112413102 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106645
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106645 0.030±0.00 0.167±0.07 0.920±0.32 0.076±0.04 0.157±0.00 0.035±0.01 0.289±0.00 0.038±0.00 0.317±0.09 0.648±0.00 44.510±6.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T3 CIL_0008T3_0002 VISTA 7:111980454-112581088
CIL_0008YS CIL_0008YS_0002 VISTA 7:111997825-112599422
CIL_0007SQ CIL_0007SQ_0002 VISTA 7:112051476-112653289
CIL_0004J1 CIL_0004J1_0002 CGP 7:112225856-112413104
CIL_0003PF CIL_0003PF_0002 CGP 7:112368308-112591692

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation
GO:0051019 IPI mitogen-activated protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256186 MICALCL-001 protein_coding Homo_sapiens 0 619

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