C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MICAL C-terminal like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256186 MICALCL-001 ENSG00000133808 9606 + 11:12286900-12359144 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256186
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256186 0.047±0.00 0.028±0.00 0.049±0.02 0.105±0.00 0.181±0.03 0.035±0.00 0.099±0.00 0.088±0.02 1.132±0.00 0.048±0.00 0.118±0.07 0.105±0.00 4.286±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T3 CIL_0008T3_0001 VISTA 11:11882278-12483702
CIL_0008YS CIL_0008YS_0001 VISTA 11:11899653-12500760
CIL_0007SQ CIL_0007SQ_0001 VISTA 11:11959946-12561868
CIL_0004J1 CIL_0004J1_0001 CGP 11:12094008-12359144
CIL_0003PF CIL_0003PF_0001 CGP 11:12276080-12530801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation
GO:0051019 ISS mitogen-activated protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051308 Micalcl-201 protein_coding Mus_musculus 0 619
ENSMUST00000106645 Micalcl-003 protein_coding Mus_musculus 0 619
ENSMUST00000153697 Micalcl-002 protein_coding Mus_musculus 0 604
ENSMUST00000140202 Micalcl-004 retained_intron Mus_musculus 0 436

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