C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003PF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133808-ENSG00000197702 CGP 9606 11:12276080-12530801
GeneTranscriptPositionBiotype
ENSG00000133808 (MICALCL)
MICAL C-terminal like
ENST00000256186 (MICALCL-001) 12286900-12359144 protein_coding
ENST00000529028 (MICALCL-002) 12276080-12287314 processed_transcript
ENST00000533534 (MICALCL-003) 12280945-12292255 protein_coding
ENSG00000197702 (PARVA)
parvin, alpha
ENST00000334956 (PARVA-001) 12377185-12530801 protein_coding
ENST00000526746 (PARVA-005) 12473744-12477924 processed_transcript
ENST00000528916 (PARVA-004) 12452735-12511533 protein_coding
ENST00000530755 (PARVA-002) 12377563-12480809 retained_intron
ENST00000533345 (PARVA-003) 12398241-12513804 retained_intron
ENST00000533392 (PARVA-006) 12473744-12504355 processed_transcript
ENSG00000254983 (RP11-573E11.2)
ENST00000526616 (RP11-573E11.2-001) 12303533-12308216 sense_intronic
ENSG00000264283 (AC025300.1)
ENST00000581154 (AC025300.1-201) 12344767-12344861 miRNA
CIL_0003PF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030771-ENSMUSG00000030770 CGP 10090 7:112368308-112591692
GeneTranscriptPositionBiotype
ENSMUSG00000030770 (Parva)
parvin, alpha
ENSMUST00000033030 (Parva-001) 112427706-112591692 protein_coding
ENSMUST00000106640 (Parva-004) 112519701-112588970 protein_coding
ENSMUST00000106643 (Parva-002) 112427505-112589629 protein_coding
ENSMUST00000123185 (Parva-005) 112501177-112547610 processed_transcript
ENSMUST00000126047 (Parva-006) 112569250-112579659 processed_transcript
ENSMUST00000139720 (Parva-003) 112427905-112552929 nonsense_mediated_decay
ENSMUSG00000030771 (Micalcl)
MICAL C-terminal like
ENSMUST00000033033 (Micalcl-001) 112374345-112395355 protein_coding
ENSMUST00000051308 (Micalcl-201) 112368308-112413104 protein_coding
ENSMUST00000106645 (Micalcl-003) 112374868-112413102 protein_coding
ENSMUST00000140202 (Micalcl-004) 112407108-112413053 retained_intron
ENSMUST00000153697 (Micalcl-002) 112381149-112413102 protein_coding
ENSMUSG00000085049 (Parvaos)
parvin, alpha, opposite strand
ENSMUST00000154848 (Parvaos-001) 112526972-112535683 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PF_0001ENSG00000133808ENST00000256186ENST00000529028ENST00000533534ENSG00000197702ENST00000334956ENST00000526746ENST00000528916ENST00000530755ENST00000533345ENST00000533392ENSG00000254983ENST00000526616ENSG00000264283ENST00000581154CIL_0003PF_0002ENSMUSG00000030770ENSMUST00000033030ENSMUST00000106640ENSMUST00000106643ENSMUST00000123185ENSMUST00000126047ENSMUST00000139720ENSMUSG00000030771ENSMUST00000033033ENSMUST00000051308ENSMUST00000106645ENSMUST00000140202ENSMUST00000153697ENSMUSG00000085049ENSMUST00000154848
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PF_0001ENSG00000133808ENST00000256186ENST00000529028ENST00000533534ENSG00000197702ENST00000334956ENST00000528916ENST00000530755ENSG00000254983ENST00000526616ENSG00000264283ENST00000581154CIL_0003PF_0002ENSMUSG00000030770ENSMUST00000033030ENSMUST00000106640ENSMUST00000106643ENSMUST00000139720ENSMUSG00000030771ENSMUST00000033033ENSMUST00000051308ENSMUST00000106645ENSMUST00000140202ENSMUST00000153697ENSMUSG00000085049ENSMUST00000154848
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133808 ENST00000256186 0.047±0.00 N/A 0.028±0.00 0.049±0.02 0.105±0.00 0.181±0.03 0.035±0.00 0.099±0.00 0.088±0.02 1.132±0.00 0.048±0.00 0.118±0.07 0.105±0.00 4.286±2.31
ENST00000529028 N/A N/A N/A N/A N/A N/A N/A N/A 0.678±0.00 N/A N/A N/A N/A N/A
ENST00000533534 0.079±0.00 N/A N/A N/A 1.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197702 ENST00000334956 32.159±0.00 10.175±0.00 N/A 4.049±2.81 11.540±8.12 13.071±9.60 4.961±3.84 4.649±4.28 6.187±3.67 11.404±0.00 1.021±0.23 13.820±3.06 20.375±1.39 7.055±4.78
ENST00000526746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.118±0.00 7.183±0.00 10.082±0.00 1.753±0.00
ENST00000530755 N/A N/A 1.567±0.00 N/A N/A N/A N/A 0.507±0.00 N/A N/A N/A N/A N/A N/A
ENST00000533345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254983 ENST00000526616 0.111±0.00 N/A N/A 0.209±0.00 N/A 0.045±0.00 0.220±0.00 0.171±0.00 0.044±0.00 0.020±0.00 N/A 0.202±0.09 N/A 0.265±0.00
ENSG00000264283 ENST00000581154 N/A N/A N/A N/A 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030770 ENSMUST00000033030 20.329±9.26 5.448±0.32 69.317±4.08 4.945±3.53 8.951±1.46 11.582±2.15 7.303±0.13 15.885±0.00 0.603±0.11 18.591±2.71 N/A 9.616±1.80 15.828±3.91 0.505±0.13
ENSMUST00000106640 14.399±0.92 5.011±0.00 N/A N/A 5.446±0.00 10.816±1.67 3.421±0.01 13.241±2.51 6.205±0.00 N/A N/A 11.599±2.02 29.793±20.54 1.318±0.24
ENSMUST00000106643 29.147±10.20 14.380±4.81 N/A 2.926±0.61 13.043±3.50 9.854±1.34 5.880±0.84 16.299±3.27 6.066±3.11 23.386±2.67 N/A 20.711±3.40 13.469±4.06 0.909±0.26
ENSMUST00000123185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00
ENSMUSG00000030771 ENSMUST00000033033 N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.21 N/A 0.045±0.02 N/A 0.090±0.01 N/A
ENSMUST00000051308 0.131±0.02 N/A 0.620±0.01 0.088±0.02 0.135±0.00 3.063±0.84 0.068±0.01 0.290±0.08 0.043±0.01 0.313±0.00 0.053±0.00 0.533±0.17 0.310±0.12 N/A
ENSMUST00000106645 N/A N/A N/A 0.030±0.00 0.167±0.07 0.920±0.32 0.076±0.04 0.157±0.00 0.035±0.01 0.289±0.00 0.038±0.00 0.317±0.09 0.648±0.00 44.510±6.33
ENSMUST00000140202 N/A N/A 0.346±0.00 1.217±0.00 N/A N/A 0.071±0.02 N/A 0.057±0.03 N/A 0.095±0.01 0.895±0.56 N/A N/A
ENSMUST00000153697 0.030±0.00 0.108±0.07 0.201±0.00 0.096±0.09 0.051±0.01 N/A N/A 0.102±0.00 N/A N/A 0.064±0.03 0.376±0.18 N/A 29.898±0.00
ENSMUSG00000085049 ENSMUST00000154848 0.168±0.05 0.085±0.00 0.265±0.00 0.092±0.03 0.143±0.07 0.221±0.00 0.030±0.00 0.032±0.00 0.037±0.03 0.164±0.08 0.053±0.01 0.186±0.09 0.052±0.02 0.026±0.01

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